BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F03SP1|AL429596
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1661 0.0
>3x_Contig1746
Length = 26672
Score = 1661 bits (838), Expect = 0.0
Identities = 841/842 (99%)
Strand = Plus / Minus
Query: 22 ttttatagaacctaaggtcaagggtattctggtgtgcgtacagcattgaaaggttgattg 81
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4736 ttttacagaacctaaggtcaagggtattctggtgtgcgtacagcattgaaaggttgattg 4677
Query: 82 gtatgacagtgggtagaccgttttgcatatccgacgtggatattgatgctcctttaccag 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4676 gtatgacagtgggtagaccgttttgcatatccgacgtggatattgatgctcctttaccag 4617
Query: 142 aatccgaactagaagtaggatccactttgggatcagcagattgtgaaacgcatatgtatg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4616 aatccgaactagaagtaggatccactttgggatcagcagattgtgaaacgcatatgtatg 4557
Query: 202 ctaatgccattgaaattttcaaattaagacgaattcaatcctctatatgtatgttcgtgt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4556 ctaatgccattgaaattttcaaattaagacgaattcaatcctctatatgtatgttcgtgt 4497
Query: 262 atggtccacgtaagtttctcgataacgacgatgagatcaatcaatcaagacaacagatca 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4496 atggtccacgtaagtttctcgataacgacgatgagatcaatcaatcaagacaacagatca 4437
Query: 322 tacttgaattggaagattggaaacagggattctcttcacaaaaatcgaataaggacatga 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4436 tacttgaattggaagattggaaacagggattctcttcacaaaaatcgaataaggacatga 4377
Query: 382 acttcatatcaactgacacttgggcaaatatgaattatcaccagtctgtggtttggttct 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4376 acttcatatcaactgacacttgggcaaatatgaattatcaccagtctgtggtttggttct 4317
Query: 442 tgagaccagtattacttcaaatcaacgattctcatagaaaagccgtagcggatggtgtag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4316 tgagaccagtattacttcaaatcaacgattctcatagaaaagccgtagcggatggtgtag 4257
Query: 502 cgatggtaacaccgactcgagaaacgttagaatggtttcaggtactcatgtattctgcat 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4256 cgatggtaacaccgactcgagaaacgttagaatggtttcaggtactcatgtattctgcat 4197
Query: 562 ctgaaataagtacatgctacgaaaatatactaaaagagtccttatctcccttgtcgcata 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4196 ctgaaataagtacatgctacgaaaatatactaaaagagtccttatctcccttgtcgcata 4137
Query: 622 acatcgacccgctcacctctatccatacattatttgtcgcaggcgtcacttatatgtatt 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4136 acatcgacccgctcacctctatccatacattatttgtcgcaggcgtcacttatatgtatt 4077
Query: 682 gtatttggttgaacgttaagttagatctaatatctggtgatcggaatgatagtgtgagat 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4076 gtatttggttgaacgttaagttagatctaatatctggtgatcggaatgatagtgtgagat 4017
Query: 742 cgatcaacgttatcaaactataccagaaactgttacagaccctagccaaacaatggcata 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4016 cgatcaacgttatcaaactataccagaaactgttacagaccctagccaaacaatggcata 3957
Query: 802 ttgggaaacttcaatacgaaagttttatgcaattatccggtaaaatcttgataaacatac 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3956 ttgggaaacttcaatacgaaagttttatgcaattatccggtaaaatcttgataaacatac 3897
Query: 862 ag 863
||
Sbjct: 3896 ag 3895
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5927
Number of Sequences: 1807
Number of extensions: 5927
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)